MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Streptococcus acidominimus
19428wB2_HT4
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 288
bases: 2,382,433 bps
CDS: 2,042
rRNA: 4
Repeat region:
tmRNA: 1
tRNA: 46
misc RNA:
Total features: 2,093
Total number of protein coding genes annotated/found:
2,042
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Items 21 - 40
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5042|JADGLI010000005.1
SEQF5042_01660
Genome Viewer
NA
AA
543/181
15258-14716
putative protein YqgN
SEQF5042|JADGLI010000005.1
SEQF5042_01661
Genome Viewer
NA
AA
1131/377
16620-15490
N-acetyldiaminopimelate deacetylase
SEQF5042|JADGLI010000005.1
SEQF5042_01662
Genome Viewer
NA
AA
699/233
17327-16629
2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-acetyltransferase
SEQF5042|JADGLI010000005.1
SEQF5042_01663
Genome Viewer
NA
AA
297/99
17907-17611
hypothetical protein
SEQF5042|JADGLI010000005.1
SEQF5042_01664
Genome Viewer
NA
AA
732/244
18678-17947
hypothetical protein
SEQF5042|JADGLI010000005.1
SEQF5042_01665
Genome Viewer
NA
AA
375/125
19865-19491
PTS system glucitol/sorbitol-specific EIIA component
SEQF5042|JADGLI010000005.1
SEQF5042_01666
Genome Viewer
NA
AA
993/331
21104-20112
PTS system glucitol/sorbitol-specific EIIB component
SEQF5042|JADGLI010000005.1
SEQF5042_01667
Genome Viewer
NA
AA
543/181
21665-21123
PTS system glucitol/sorbitol-specific EIIC component
SEQF5042|JADGLI010000005.1
SEQF5042_01668
Genome Viewer
NA
AA
477/159
22488-22012
hypothetical protein
SEQF5042|JADGLI010000005.1
SEQF5042_01669
Genome Viewer
NA
AA
1836/612
24337-22502
hypothetical protein
SEQF5042|JADGLI010000005.1
SEQF5042_01670
Genome Viewer
NA
AA
801/267
25147-24347
Dihydroanticapsin 7-dehydrogenase
SEQF5042|JADGLI010000005.1
SEQF5042_01671
Genome Viewer
NA
AA
1971/657
27491-25521
Transketolase
SEQF5042|JADGLI010000005.1
SEQF5042_01672
Genome Viewer
NA
AA
1062/354
29246-28185
D-arabitol-phosphate dehydrogenase
SEQF5042|JADGLI010000005.1
SEQF5042_01673
Genome Viewer
NA
AA
1053/351
30309-29257
Galactitol 1-phosphate 5-dehydrogenase
SEQF5042|JADGLI010000005.1
SEQF5042_01674
Genome Viewer
NA
AA
1275/425
32305-31031
PTS system galactitol-specific EIIC component
SEQF5042|JADGLI010000005.1
SEQF5042_01675
Genome Viewer
NA
AA
294/98
32620-32327
PTS system galactitol-specific EIIB component
SEQF5042|JADGLI010000005.1
SEQF5042_01676
Genome Viewer
NA
AA
477/159
33344-32868
hypothetical protein
SEQF5042|JADGLI010000005.1
SEQF5042_01677
Genome Viewer
NA
AA
1929/643
35299-33371
Transcriptional regulator ManR
SEQF5042|JADGLI010000005.1
SEQF5042_01678
Genome Viewer
NA
AA
2379/793
35559-37937
Xylulose-5-phosphate phosphoketolase
SEQF5042|JADGLI010000005.1
SEQF5042_01679
Genome Viewer
NA
AA
285/95
38593-38309
hypothetical protein
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Items 21 - 40
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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